Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0406 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1414317 bp
Thymine Count
1409913 bp
Guanine Count
1434864 bp
Cytosine Count
1433688 bp
Genome Length
5693058 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
531 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carbohydrate diacid regulator | SAMEA3472056_00979 | Not Available | Negative | 1021157 - 1022314 | 43660.1 |
| protease do precursor | SAMEA3472056_00980 | Not Available | Negative | 1022469 - 1023893 | 49357.3 |
| deoxyguanosinetriphosphate triphosphohydrolase | SAMEA3472056_00981 | Not Available | Negative | 1024023 - 1025540 | 59444.2 |
| mta/sah nucleosidase | SAMEA3472056_00982 | Not Available | Positive | 1025624 - 1026322 | 24355.4 |
| vitamin b12-binding protein | SAMEA3472056_00983 | Not Available | Positive | 1026315 - 1027115 | 29358.4 |
| putative membrane protein yads | SAMEA3472056_00984 | Not Available | Positive | 1027153 - 1027776 | 22129.1 |
| iron-sulfur cluster insertion protein erpa | SAMEA3472056_00985 | Not Available | Negative | 1027823 - 1028167 | 12101.2 |
| h(+)/cl(-) exchange transporter | SAMEA3472056_00986 | Not Available | Negative | 1028249 - 1029670 | 50337.9 |
| glutamate-1-semialdehyde 2,1-aminomutase | SAMEA3472056_00987 | Not Available | Positive | 1029895 - 1031175 | 45328.7 |
| ferrichrome transport system permease | SAMEA3472056_00988 | Not Available | Negative | 1031210 - 1033192 | 70381.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





