Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0406 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1414317 bp
Thymine Count
1409913 bp
Guanine Count
1434864 bp
Cytosine Count
1433688 bp
Genome Length
5693058 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
531 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative transporter | SAMEA3472056_00925 | Not Available | Positive | 967108 - 967695 | 21274.5 |
| autonomous glycyl radical cofactor | SAMEA3472056_00926 | Not Available | Negative | 967751 - 968134 | 14285.0 |
| uracil-dna glycosylase | SAMEA3472056_00927 | Not Available | Positive | 968439 - 969128 | 25662.6 |
| methyltransferase | SAMEA3472056_00928 | Not Available | Negative | 969176 - 970213 | 37800.5 |
| thioredoxin 2 | SAMEA3472056_00929 | Not Available | Positive | 970420 - 970839 | 15555.6 |
| dtw domain-containing protein | SAMEA3472056_00930 | Not Available | Positive | 970908 - 971606 | 25998.4 |
| putative acyl-coa synthetase | SAMEA3472056_00931 | Not Available | Positive | 971638 - 974298 | 97906.1 |
| phosphatidylserine synthase | SAMEA3472056_00932 | Not Available | Positive | 974412 - 975767 | 52804.8 |
| lipoprotein | SAMEA3472056_00933 | Not Available | Positive | 975864 - 976136 | 9931.43 |
| alpha-ketoglutarate transporter | SAMEA3472056_00934 | Not Available | Negative | 976133 - 977431 | 47055.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





