Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0406 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1414317 bp
Thymine Count
1409913 bp
Guanine Count
1434864 bp
Cytosine Count
1433688 bp
Genome Length
5693058 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
531 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphoribosylformylglycinamidine synthase | SAMEA3472056_00904 | Not Available | Negative | 943516 - 947403 | 141481.0 |
| putative lytic transglycosylase | SAMEA3472056_00905 | Not Available | Positive | 947661 - 949217 | 58301.3 |
| pp_00867 | SAMEA3472056_00906 | Not Available | Negative | 949214 - 949717 | Not Available |
| had hydrolase yfhb | SAMEA3472056_00907 | Not Available | Negative | 949775 - 950410 | 24437.8 |
| rpir-family transcriptional regulator | SAMEA3472056_00908 | Not Available | Positive | 950619 - 951467 | 30737.4 |
| 4fe-4s binding protein | SAMEA3472056_00909 | Not Available | Positive | 951523 - 951783 | 9862.88 |
| holo-[acyl-carrier-protein] synthase | SAMEA3472056_00910 | Not Available | Negative | 952479 - 952859 | 14125.2 |
| pyridoxine 5'-phosphate synthase | SAMEA3472056_00911 | Not Available | Negative | 952859 - 953590 | 26385.9 |
| dna repair protein | SAMEA3472056_00912 | Not Available | Negative | 953602 - 954330 | 27350.1 |
| gtp-binding protein era | SAMEA3472056_00913 | Not Available | Negative | 954342 - 955247 | 33812.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





