Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0406 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1414317 bp
Thymine Count
1409913 bp
Guanine Count
1434864 bp
Cytosine Count
1433688 bp
Genome Length
5693058 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
531 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hca operon transcriptional activator | SAMEA3472056_00882 | Not Available | Negative | 919983 - 920873 | 32812.2 |
| 3-phenylpropionate dioxygenase alpha subunit | SAMEA3472056_00883 | Not Available | Positive | 921009 - 922370 | 51111.8 |
| 3-phenylpropionate dioxygenase beta subunit | SAMEA3472056_00884 | Not Available | Positive | 922367 - 922885 | 20580.3 |
| 3-phenylpropionate dioxygenase ferredoxin subunit | SAMEA3472056_00885 | Not Available | Positive | 922885 - 923205 | 11329.3 |
| 2,3-dihydroxy-2,3-dihydro-phenylpropionate dehydrogenase | SAMEA3472056_00886 | Not Available | Positive | 923202 - 924014 | 28440.3 |
| 3-phenylpropionate dioxygenase ferredoxin--nad(+) reductase component | SAMEA3472056_00887 | Not Available | Positive | 924024 - 925226 | 43908.6 |
| inner membrane protein | SAMEA3472056_00888 | Not Available | Positive | 925323 - 925745 | 15212.3 |
| putative aldose 1-epimerase | SAMEA3472056_00889 | Not Available | Negative | 925793 - 926665 | 32624.1 |
| putative zinc-binding dehydrogenase | SAMEA3472056_00890 | Not Available | Negative | 926677 - 927735 | 37981.9 |
| abc transporter permease | SAMEA3472056_00891 | Not Available | Negative | 927801 - 928799 | 34543.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





