Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0406 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1414317 bp
Thymine Count
1409913 bp
Guanine Count
1434864 bp
Cytosine Count
1433688 bp
Genome Length
5693058 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
531 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| co-chaperone hscb | SAMEA3472056_00871 | Not Available | Negative | 911111 - 911626 | 20152.8 |
| iron-sulfur cluster assembly protein | SAMEA3472056_00872 | Not Available | Negative | 911722 - 912045 | 11556.7 |
| nifu-like protein | SAMEA3472056_00873 | Not Available | Negative | 912062 - 912448 | 13849.3 |
| cysteine desulfurase | SAMEA3472056_00874 | Not Available | Negative | 912476 - 913690 | 45092.2 |
| fes cluster assembly transcription factor iscr | SAMEA3472056_00876 | Not Available | Negative | 913802 - 914290 | 17337.6 |
| putative rna methyltransferase | SAMEA3472056_00877 | Not Available | Negative | 914560 - 915300 | 27049.6 |
| inositol-1-monophosphatase | SAMEA3472056_00878 | Not Available | Positive | 915419 - 916222 | 29173.8 |
| peptidase | SAMEA3472056_00879 | Not Available | Positive | 916367 - 917221 | 31461.6 |
| stationary phase inducible protein csie | SAMEA3472056_00880 | Not Available | Positive | 917412 - 918692 | 48999.4 |
| putative 3-phenylpropionate permease | SAMEA3472056_00881 | Not Available | Negative | 918684 - 919823 | 41623.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





