Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0406 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1414317 bp
Thymine Count
1409913 bp
Guanine Count
1434864 bp
Cytosine Count
1433688 bp
Genome Length
5693058 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
531 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| anaerobic dimethyl sulfoxide reductase subunit c | SAMEA3472056_00860 | Not Available | Negative | 893606 - 894427 | 29625.1 |
| dimethylsulfoxide reductase subunit b | SAMEA3472056_00861 | Not Available | Negative | 894420 - 895049 | 22598.9 |
| anaerobic dimethyl sulfoxide reductase subunit a | SAMEA3472056_00862 | Not Available | Negative | 895046 - 897427 | 88375.0 |
| penicillin-binding protein 1c | SAMEA3472056_00863 | Not Available | Negative | 897591 - 899903 | 85088.7 |
| putative protease inhibitor | SAMEA3472056_00864 | Not Available | Negative | 899904 - 904865 | 181501.0 |
| 3-mercaptopyruvate sulfurtransferase | SAMEA3472056_00865 | Not Available | Positive | 905072 - 905917 | 30827.5 |
| peptidase b (aminopeptidase b) | SAMEA3472056_00867 | Not Available | Negative | 907353 - 908636 | 46210.6 |
| fes assembly protein iscx | SAMEA3472056_00868 | Not Available | Negative | 908695 - 908895 | 7731.92 |
| ferredoxin | SAMEA3472056_00869 | Not Available | Negative | 908907 - 909242 | 12345.5 |
| chaperone protein hsca | SAMEA3472056_00870 | Not Available | Negative | 909244 - 911094 | 65656.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





