Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0406 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1414317 bp
Thymine Count
1409913 bp
Guanine Count
1434864 bp
Cytosine Count
1433688 bp
Genome Length
5693058 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
531 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| galactoside permease | SAMEA3472056_00707 | Not Available | Negative | 732742 - 733989 | 46873.2 |
| aminoimidazole riboside kinase | SAMEA3472056_00708 | Not Available | Negative | 734061 - 734975 | 33062.7 |
| Levanase | SAMEA3472056_00709 | Not Available | Positive | 735191 - 736624 | 54366.8 |
| Attl | Not Available | Not Available | Positive | 2733564 - 2733585 | Not Available |
| Integrase | SAMEA3472056_02662 | Not Available | Positive | 2733589 - 2734788 | 45279.3 |
| uncharacterised protein | SAMEA3472056_02663 | Not Available | Negative | 2734746 - 2734964 | 8116.22 |
| uncharacterised protein | SAMEA3472056_02664 | Not Available | Negative | 2734964 - 2735614 | 24878.1 |
| uncharacterised protein | SAMEA3472056_02665 | Not Available | Negative | 2735616 - 2735795 | 7181.51 |
| Ninb protein | SAMEA3472056_02666 | Not Available | Negative | 2735792 - 2736223 | 16394.6 |
| Hypothetical protein | SAMEA3472056_02667 | Not Available | Negative | 2736210 - 2736437 | 8628.27 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





