Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0406 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1414317 bp
Thymine Count
1409913 bp
Guanine Count
1434864 bp
Cytosine Count
1433688 bp
Genome Length
5693058 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
531 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphoribosylglycinamide formyltransferase 1 | SAMEA3472056_00839 | Not Available | Positive | 869982 - 870620 | 23239.6 |
| polyphosphate kinase | SAMEA3472056_00840 | Not Available | Positive | 870792 - 872858 | 80436.1 |
| exopolyphosphatase | SAMEA3472056_00841 | Not Available | Positive | 872863 - 874404 | 58139.5 |
| putative signal transduction protein | SAMEA3472056_00842 | Not Available | Negative | 874443 - 876686 | 85652.8 |
| uncharacterised protein | SAMEA3472056_00843 | Not Available | Negative | 876868 - 877020 | 5689.89 |
| protein | SAMEA3472056_00844 | Not Available | Positive | 877056 - 877229 | 6856.35 |
| putative lipoprotein | SAMEA3472056_00845 | Not Available | Positive | 877543 - 878058 | 17574.9 |
| uncharacterised protein | SAMEA3472056_00846 | Not Available | Positive | 878074 - 878613 | 20245.4 |
| bifunctional gmp synthase/glutamine amidotransferase protein | SAMEA3472056_00847 | Not Available | Negative | 878706 - 880283 | 58682.6 |
| inosine 5'-monophosphate dehydrogenase | SAMEA3472056_00848 | Not Available | Negative | 880352 - 881818 | 52025.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





