Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0406 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1414317 bp
Thymine Count
1409913 bp
Guanine Count
1434864 bp
Cytosine Count
1433688 bp
Genome Length
5693058 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
531 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein processing element | SAMEA3472056_00829 | Not Available | Positive | 859205 - 859618 | 15592.8 |
| 2-component regulator | SAMEA3472056_00830 | Not Available | Positive | 859648 - 861660 | 75325.7 |
| formate transporter focb | SAMEA3472056_00831 | Not Available | Positive | 861682 - 862530 | 30532.3 |
| putative permease | SAMEA3472056_00832 | Not Available | Negative | 862568 - 863629 | 39196.9 |
| putative peptidase | SAMEA3472056_00833 | Not Available | Positive | 863842 - 865305 | 53911.1 |
| putative glutaredoxin | SAMEA3472056_00834 | Not Available | Positive | 865326 - 865685 | 13417.4 |
| dnaa family protein hda | SAMEA3472056_00835 | Not Available | Negative | 865823 - 866569 | 28371.4 |
| uracil transporter | SAMEA3472056_00836 | Not Available | Negative | 866619 - 867908 | 45063.0 |
| uracil phosphoribosyltransferase | SAMEA3472056_00837 | Not Available | Negative | 867994 - 868620 | 22534.6 |
| phosphoribosylaminoimidazole synthetase | SAMEA3472056_00838 | Not Available | Positive | 868945 - 869982 | 36875.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





