Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0406 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1414317 bp
Thymine Count
1409913 bp
Guanine Count
1434864 bp
Cytosine Count
1433688 bp
Genome Length
5693058 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
531 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bifunctional folc protein | SAMEA3472056_00608 | Not Available | Negative | 655663 - 656931 | 45467.2 |
| acetylcoa carboxylase | SAMEA3472056_00609 | Not Available | Negative | 657001 - 657915 | 33323.9 |
| inner membrane protein | SAMEA3472056_00610 | Not Available | Negative | 658071 - 658730 | 24511.7 |
| trna pseudouridine synthase a | SAMEA3472056_00611 | Not Available | Negative | 658813 - 659625 | 30402.3 |
| putative semialdehyde dehydrogenase | SAMEA3472056_00612 | Not Available | Negative | 659625 - 660638 | 36366.1 |
| erythronate-4-phosphate dehydrogenase | SAMEA3472056_00613 | Not Available | Negative | 660704 - 661840 | 41426.1 |
| cell division protein | SAMEA3472056_00614 | Not Available | Positive | 661939 - 662934 | 36670.5 |
| major facilitator superfamily protein | SAMEA3472056_00615 | Not Available | Negative | 662931 - 664109 | 40495.8 |
| 3-oxoacyl-acp synthase | SAMEA3472056_00616 | Not Available | Negative | 664384 - 665604 | 42615.8 |
| trna u-34 5-methylaminomethyl-2-thiouridine biosynthesis protein mnmc | SAMEA3472056_00617 | Not Available | Positive | 665763 - 667769 | 74453.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





