Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0406 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1414317 bp
Thymine Count
1409913 bp
Guanine Count
1434864 bp
Cytosine Count
1433688 bp
Genome Length
5693058 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
531 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transposase | SAMEA3472056_00598 | Not Available | Negative | 646353 - 647255 | 34652.1 |
| histidine/lysine/arginine/ornithine transporter subunit | SAMEA3472056_00599 | Not Available | Negative | 647452 - 648225 | 28626.8 |
| histidine transport system permease hism | SAMEA3472056_00600 | Not Available | Negative | 648233 - 648949 | 26871.3 |
| histidine abc transporter permease | SAMEA3472056_00601 | Not Available | Negative | 648946 - 649632 | 24591.8 |
| histidine abc transporter, substrate-binding periplasmic protein | SAMEA3472056_00602 | Not Available | Negative | 649722 - 650504 | 28470.8 |
| lysine-arginine-ornithine-binding periplasmic protein | SAMEA3472056_00603 | Not Available | Negative | 650725 - 651507 | 28007.1 |
| 3-octaprenyl-4-hydroxybenzoate carboxy-lyase | SAMEA3472056_00604 | Not Available | Negative | 651773 - 652342 | 20696.3 |
| amidophosphoribosyltransferase | SAMEA3472056_00605 | Not Available | Negative | 652437 - 653954 | 56491.3 |
| colicin v production protein | SAMEA3472056_00606 | Not Available | Negative | 653991 - 654479 | 17991.0 |
| putative peptidoglycan-binding protein | SAMEA3472056_00607 | Not Available | Negative | 655011 - 655673 | 22969.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





