Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0406 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1414317 bp
Thymine Count
1409913 bp
Guanine Count
1434864 bp
Cytosine Count
1433688 bp
Genome Length
5693058 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
531 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| inner membrane protein | SAMEA3472056_00588 | Not Available | Negative | 636381 - 636836 | 17214.1 |
| acetate/propionate kinase | SAMEA3472056_00589 | Not Available | Positive | 637174 - 638376 | 43293.0 |
| phosphate acetyltransferase | SAMEA3472056_00590 | Not Available | Positive | 638451 - 640595 | 77162.5 |
| putative c4-dicarboxylate anaerobic transporter | SAMEA3472056_00591 | Not Available | Positive | 640827 - 642305 | 53184.1 |
| nudix hydrolase | SAMEA3472056_00592 | Not Available | Negative | 642338 - 642880 | 20376.9 |
| putative phosphodiesterase | SAMEA3472056_00593 | Not Available | Negative | 642938 - 643489 | 19992.1 |
| putative glutathione s-transferase | SAMEA3472056_00594 | Not Available | Negative | 643545 - 644189 | 24342.1 |
| putative glutathione s-transferase | SAMEA3472056_00595 | Not Available | Positive | 644325 - 644972 | 24444.2 |
| d-erythro-7,8-dihydroneopterin triphosphate epimerase | SAMEA3472056_00596 | Not Available | Positive | 645029 - 645391 | 14082.8 |
| nad(p)-binding rossmann-fold domain | SAMEA3472056_00597 | Not Available | Positive | 645412 - 646305 | 32689.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





