Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0406 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1414317 bp
Thymine Count
1409913 bp
Guanine Count
1434864 bp
Cytosine Count
1433688 bp
Genome Length
5693058 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
531 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Prophage repressor | SAMEA3472056_00688 | Not Available | Positive | 722820 - 723536 | 25883.9 |
| Hypothetical protein | SAMEA3472056_00689 | Not Available | Positive | 723554 - 723922 | 13174.2 |
| Probable regulatory protein n (early gene regulator) | SAMEA3472056_00690 | Not Available | Positive | 724290 - 724589 | 11435.1 |
| Hypothetical protein | SAMEA3472056_00691 | Not Available | Positive | 724598 - 725068 | 18553.1 |
| Orf53 | SAMEA3472056_00692 | Not Available | Positive | 725251 - 726219 | 36866.5 |
| Ciii protein | SAMEA3472056_00693 | Not Available | Positive | 726244 - 726375 | 4910.23 |
| Kil protein | SAMEA3472056_00694 | Not Available | Positive | 726360 - 726512 | 5886.32 |
| Ciii protein | SAMEA3472056_00695 | Not Available | Positive | 726588 - 726758 | 6693.22 |
| Erf protein | SAMEA3472056_00696 | Not Available | Positive | 726769 - 727374 | 22277.0 |
| Hypothetical protein | SAMEA3472056_00697 | Not Available | Positive | 727374 - 727757 | 14151.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





