Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0406 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1414317 bp
Thymine Count
1409913 bp
Guanine Count
1434864 bp
Cytosine Count
1433688 bp
Genome Length
5693058 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
531 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nadh-quinone oxidoreductase subunit c/d | SAMEA3472056_00578 | Not Available | Negative | 625759 - 627561 | 68728.5 |
| nadh dehydrogenase i subunit b | SAMEA3472056_00579 | Not Available | Negative | 627655 - 628317 | 25057.3 |
| nadh-quinone oxidoreductase subunit a | SAMEA3472056_00580 | Not Available | Negative | 628333 - 628776 | 16458.2 |
| uncharacterised protein | SAMEA3472056_00581 | Not Available | Positive | 629039 - 629203 | 6476.09 |
| nadh dehydrogenase operon transcriptional regulator | SAMEA3472056_00582 | Not Available | Negative | 629407 - 630345 | 34563.7 |
| putative aminotransferase | SAMEA3472056_00583 | Not Available | Positive | 631265 - 632482 | 45535.0 |
| 5'-nucleotidase | SAMEA3472056_00584 | Not Available | Positive | 632566 - 633165 | 22681.2 |
| putative transporter | SAMEA3472056_00585 | Not Available | Negative | 633224 - 635056 | 65876.0 |
| putative phosphatase/phosphohexomutase | SAMEA3472056_00586 | Not Available | Negative | 635143 - 635793 | 23012.8 |
| yfbu family protein | SAMEA3472056_00587 | Not Available | Negative | 635804 - 636298 | 19537.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





