Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0406 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1414317 bp
Thymine Count
1409913 bp
Guanine Count
1434864 bp
Cytosine Count
1433688 bp
Genome Length
5693058 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
531 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| o-succinylbenzoate synthase | SAMEA3472056_00558 | Not Available | Negative | 603116 - 604078 | 35436.5 |
| naphthoate synthase menb | SAMEA3472056_00559 | Not Available | Negative | 604078 - 604935 | 31634.9 |
| acyl-coa thioester hydrolase | SAMEA3472056_00560 | Not Available | Negative | 604950 - 605708 | 27698.9 |
| 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate synthase | SAMEA3472056_00561 | Not Available | Negative | 605705 - 607375 | 61320.5 |
| menaquinone-specific isochorismate synthase | SAMEA3472056_00562 | Not Available | Negative | 607464 - 608759 | 48777.3 |
| regulatory protein ampe | SAMEA3472056_00563 | Not Available | Negative | 608838 - 609143 | 11306.3 |
| putative acyltransferase with acyl-coa n-acyltransferase domain | SAMEA3472056_00564 | Not Available | Negative | 609198 - 609659 | 17420.7 |
| ribonuclease bn | SAMEA3472056_00565 | Not Available | Positive | 609724 - 610641 | 32979.7 |
| deubiquitinase | SAMEA3472056_00566 | Not Available | Positive | 610832 - 612052 | 46519.0 |
| protein | SAMEA3472056_00567 | Not Available | Positive | 613182 - 613685 | 19019.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





