Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0406 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1414317 bp
Thymine Count
1409913 bp
Guanine Count
1434864 bp
Cytosine Count
1433688 bp
Genome Length
5693058 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
531 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| anaerobic glycerol-3-phosphate dehydrogenase subunit c | SAMEA3472056_00538 | Not Available | Positive | 583529 - 584719 | 44110.4 |
| putative transposase | SAMEA3472056_00539 | Not Available | Positive | 584912 - 585883 | 37406.9 |
| putative transposase (fragment) | SAMEA3472056_00540 | Not Available | Positive | 585896 - 586117 | 8116.74 |
| putative carbon-carbon lyase | SAMEA3472056_00541 | Not Available | Negative | 586158 - 586961 | 28893.6 |
| transport protein yfav | SAMEA3472056_00542 | Not Available | Negative | 586979 - 588268 | 46197.3 |
| mandelate racemase/muconate lactonizing protein | SAMEA3472056_00543 | Not Available | Negative | 588325 - 589530 | 44226.0 |
| transcriptional regulator yfax | SAMEA3472056_00544 | Not Available | Negative | 589545 - 590327 | 28934.9 |
| putative molybdopterin-binding protein | SAMEA3472056_00545 | Not Available | Negative | 590547 - 591749 | 44254.3 |
| outer membrane porin protein | SAMEA3472056_00546 | Not Available | Negative | 591849 - 592391 | 18596.8 |
| nudix-family hydrolase | SAMEA3472056_00547 | Not Available | Positive | 592670 - 593095 | 16398.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





