Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0406 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1414317 bp
Thymine Count
1409913 bp
Guanine Count
1434864 bp
Cytosine Count
1433688 bp
Genome Length
5693058 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
531 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf2135 family protein, function uncharacterised | SAMEA3472056_00518 | Not Available | Negative | 551766 - 552542 | 28286.2 |
| protein | SAMEA3472056_00519 | Not Available | Negative | 552547 - 554196 | 61539.4 |
| large extracellular alpha-helical protein | SAMEA3472056_00520 | Not Available | Negative | 554197 - 558591 | 162502.0 |
| protein | SAMEA3472056_00521 | Not Available | Negative | 558735 - 559358 | 23838.6 |
| putative membrane protein yfaa | SAMEA3472056_00522 | Not Available | Negative | 559355 - 561043 | 62494.6 |
| dna gyrase subunit a | SAMEA3472056_00523 | Not Available | Negative | 561192 - 563819 | 96983.3 |
| 3-demethylubiquinone-9 3-methyltransferase | SAMEA3472056_00524 | Not Available | Positive | 563966 - 564688 | 26544.0 |
| adhesin | SAMEA3472056_00525 | Not Available | Negative | 564829 - 568581 | 131314.0 |
| ribonucleoside-diphosphate reductase | SAMEA3472056_00526 | Not Available | Positive | 569277 - 571562 | 85752.9 |
| ribonucleotide-diphosphate reductase subunit beta | SAMEA3472056_00527 | Not Available | Positive | 571796 - 572926 | 43503.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





