Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0406 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1414317 bp
Thymine Count
1409913 bp
Guanine Count
1434864 bp
Cytosine Count
1433688 bp
Genome Length
5693058 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
531 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| outer membrane porin protein c | SAMEA3472056_00507 | Not Available | Negative | 536036 - 537148 | 40622.6 |
| two-component system sensor kinase | SAMEA3472056_00509 | Not Available | Positive | 537887 - 540559 | 100327.0 |
| transcriptional regulator rcsb | SAMEA3472056_00510 | Not Available | Positive | 540576 - 541226 | 23672.0 |
| two-component system sensor kinase | SAMEA3472056_00511 | Not Available | Negative | 541426 - 544275 | 106517.0 |
| sensory histidine kinase atos | SAMEA3472056_00512 | Not Available | Positive | 544442 - 546268 | 67801.2 |
| acetoacetate metabolism regulator (two-component system response regulator) | SAMEA3472056_00513 | Not Available | Positive | 546265 - 547650 | 52128.5 |
| acetate coa-transferase subunit alpha | SAMEA3472056_00514 | Not Available | Positive | 547846 - 548508 | 23527.7 |
| acetate coa-transferase subunit beta | SAMEA3472056_00515 | Not Available | Positive | 548508 - 549158 | 22908.0 |
| short-chain fatty acid transporter | SAMEA3472056_00516 | Not Available | Positive | 549155 - 550477 | 47530.6 |
| acetyl-coa acetyltransferase | SAMEA3472056_00517 | Not Available | Positive | 550508 - 551692 | 40388.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





