Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0406 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1414317 bp
Thymine Count
1409913 bp
Guanine Count
1434864 bp
Cytosine Count
1433688 bp
Genome Length
5693058 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
531 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| outer membrane protein pgaa | SAMEA3472056_00497 | Not Available | Negative | 521260 - 523683 | 92392.0 |
| putative diguanylate cyclase | SAMEA3472056_00498 | Not Available | Positive | 524272 - 525630 | 51720.6 |
| rtn-like protein | SAMEA3472056_00499 | Not Available | Positive | 525728 - 527338 | 60726.1 |
| fidl-like protein | SAMEA3472056_00500 | Not Available | Negative | 527440 - 527931 | 19014.6 |
| transcriptional regulator | SAMEA3472056_00501 | Not Available | Negative | 528115 - 528747 | 23886.8 |
| malate:quinone oxidoreductase | SAMEA3472056_00502 | Not Available | Negative | 529498 - 531144 | 60234.0 |
| abc transporter atpase/permease | SAMEA3472056_00503 | Not Available | Negative | 531362 - 533005 | 61516.4 |
| alpha-ketoglutarate-dependent dioxygenase (alkylated dna repair protein) | SAMEA3472056_00504 | Not Available | Negative | 533081 - 533731 | 24064.8 |
| regulatory protein of adaptative response | SAMEA3472056_00505 | Not Available | Negative | 533731 - 534795 | 39253.8 |
| thiamine biosynthesis lipoprotein | SAMEA3472056_00506 | Not Available | Negative | 534869 - 535924 | 38622.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





