Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0406 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1414317 bp
Thymine Count
1409913 bp
Guanine Count
1434864 bp
Cytosine Count
1433688 bp
Genome Length
5693058 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
531 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Anaerobic ribonucleoside-triphosphate reductase-activating protein | SAMEA3472056_00329 | Not Available | Negative | 345885 - 346682 | 30086.0 |
| Attl | Not Available | Not Available | Positive | 346611 - 346623 | Not Available |
| Integrase | SAMEA3472056_00330 | Not Available | Negative | 346714 - 347709 | 37948.1 |
| C protein | SAMEA3472056_00331 | Not Available | Negative | 347803 - 348102 | 11437.6 |
| Ribosomal protein s15p/s13e | SAMEA3472056_00332 | Not Available | Positive | 348211 - 348567 | 13473.9 |
| Hypothetical protein | SAMEA3472056_00333 | Not Available | Positive | 348578 - 348748 | 6532.22 |
| Replication gene b protein | SAMEA3472056_00334 | Not Available | Positive | 348745 - 349245 | 19941.1 |
| Hypothetical protein | SAMEA3472056_00335 | Not Available | Positive | 349309 - 349533 | 8338.93 |
| Hypothetical protein | SAMEA3472056_00336 | Not Available | Positive | 349533 - 349835 | 11325.8 |
| Gp82 | SAMEA3472056_00337 | Not Available | Positive | 349835 - 350059 | 8265.84 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





