Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0376 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1354521 bp
Thymine Count
1357943 bp
Guanine Count
1361318 bp
Cytosine Count
1368393 bp
Genome Length
5442589 bp
Protein-coding Genes
4834 genes
Non-Coding Genes
462 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Hypothetical protein | SAMEA3472044_00203 | Not Available | Negative | 213450 - 213791 | 12839.7 |
| Hypothetical protein | SAMEA3472044_00204 | Not Available | Negative | 213755 - 213955 | 7703.4 |
| Regulatory cii family protein | SAMEA3472044_00205 | Not Available | Negative | 213963 - 214472 | 18113.9 |
| Regulator | SAMEA3472044_00206 | Not Available | Negative | 214536 - 214739 | 7530.23 |
| Repressor protein ci | SAMEA3472044_00207 | Not Available | Positive | 214883 - 215458 | 21733.1 |
| putative kap-ntpase protein | SAMEA3472044_00208 | Not Available | Positive | 215490 - 216821 | 50381.3 |
| Attr | Not Available | Not Available | Positive | 216766 - 216780 | Not Available |
| Tyrosine-type recombinase/integrase | SAMEA3472044_00209 | Not Available | Positive | 216902 - 217933 | 39397.0 |
| t3ss secreted effector espj | SAMEA3472044_00287 | Not Available | Positive | 299441 - 300094 | 24584.8 |
| uncharacterised protein | SAMEA3472044_00288 | Not Available | Negative | 300107 - 300328 | 8210.77 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





