Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0376 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1354521 bp
Thymine Count
1357943 bp
Guanine Count
1361318 bp
Cytosine Count
1368393 bp
Genome Length
5442589 bp
Protein-coding Genes
4834 genes
Non-Coding Genes
462 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bacteriophage recombination protein | SAMEA3472044_05449 | Not Available | Positive | 5414421 - 5415206 | 29720.3 |
| gtp-binding protein | SAMEA3472044_05451 | Not Available | Positive | 5415360 - 5416544 | 43493.1 |
| acyltransferase | SAMEA3472044_05452 | Not Available | Negative | 5416585 - 5417154 | 22343.1 |
| t3ss secreted effector nlea-like protein | SAMEA3472044_05454 | Not Available | Positive | 5417341 - 5417736 | 14424.8 |
| t3ss secreted effector nleg-like protein | SAMEA3472044_05455 | Not Available | Negative | 5418430 - 5419077 | 23308.0 |
| transposase | SAMEA3472044_05456 | Not Available | Positive | 5419357 - 5420379 | 39903.2 |
| uncharacterised protein | SAMEA3472044_05457 | Not Available | Positive | 5421407 - 5421949 | 20591.4 |
| uncharacterised protein | SAMEA3472044_05458 | Not Available | Positive | 5422079 - 5422201 | 4795.81 |
| t3ss secreted effector nlea-like protein | SAMEA3472044_05459 | Not Available | Negative | 5422430 - 5422825 | 14449.8 |
| ybl17 | SAMEA3472044_05460 | Not Available | Negative | 5423109 - 5423324 | 8061.85 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





