Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0376 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1354521 bp
Thymine Count
1357943 bp
Guanine Count
1361318 bp
Cytosine Count
1368393 bp
Genome Length
5442589 bp
Protein-coding Genes
4834 genes
Non-Coding Genes
462 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phage protein | SAMEA3472044_05435 | Not Available | Positive | 5402815 - 5403510 | 24950.8 |
| phage protein | SAMEA3472044_05436 | Not Available | Positive | 5403525 - 5404511 | 36203.0 |
| phage protein | SAMEA3472044_05437 | Not Available | Positive | 5404563 - 5405000 | 15269.0 |
| putative repfib replication protein a | SAMEA3472044_05439 | Not Available | Positive | 5408903 - 5409880 | 37318.1 |
| uncharacterised protein | SAMEA3472044_05440 | Not Available | Negative | 5409956 - 5410075 | 4405.09 |
| putative recombinase | SAMEA3472044_05441 | Not Available | Negative | 5410165 - 5410680 | 19969.5 |
| rna-directed dna polymerase (group ii intron maturase) | SAMEA3472044_05443 | Not Available | Negative | 5410837 - 5412111 | 49478.4 |
| putative single-stranded dna binding protein of prophage | SAMEA3472044_05445 | Not Available | Positive | 5413326 - 5413694 | 13811.1 |
| kil protein of bacteriphage bp-933w | SAMEA3472044_05447 | Not Available | Positive | 5413900 - 5414043 | 5533.86 |
| host-nuclease inhibitor protein gam | SAMEA3472044_05448 | Not Available | Positive | 5414119 - 5414415 | 11628.5 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





