Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0376 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1354521 bp
Thymine Count
1357943 bp
Guanine Count
1361318 bp
Cytosine Count
1368393 bp
Genome Length
5442589 bp
Protein-coding Genes
4834 genes
Non-Coding Genes
462 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative transposase subunit | SAMEA3472044_05389 | Not Available | Positive | 5364605 - 5364871 | 10441.8 |
| transposase, orf b, is3 family, is407 group | SAMEA3472044_05390 | Not Available | Positive | 5364895 - 5365266 | 14723.1 |
| transposase | SAMEA3472044_05391 | Not Available | Positive | 5365332 - 5365649 | 12417.3 |
| putative transposase orf 1, is66 family | SAMEA3472044_05392 | Not Available | Positive | 5366433 - 5367824 | 51817.0 |
| membrane protein, yeer | SAMEA3472044_05393 | Not Available | Positive | 5367968 - 5369506 | 54805.0 |
| uncharacterised protein | SAMEA3472044_05394 | Not Available | Positive | 5369582 - 5370037 | 16902.1 |
| putative plasmid-like protein | SAMEA3472044_05395 | Not Available | Positive | 5370116 - 5370349 | 8777.4 |
| cp4-57 prophage protein | SAMEA3472044_05396 | Not Available | Positive | 5370449 - 5371267 | 31143.3 |
| anti-restriction protein | SAMEA3472044_05397 | Not Available | Positive | 5371322 - 5371807 | 18184.4 |
| putative dna repair protein | SAMEA3472044_05398 | Not Available | Positive | 5371823 - 5372299 | 17647.4 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





