Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0376 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1354521 bp
Thymine Count
1357943 bp
Guanine Count
1361318 bp
Cytosine Count
1368393 bp
Genome Length
5442589 bp
Protein-coding Genes
4834 genes
Non-Coding Genes
462 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterised protein | SAMEA3472044_05367 | Not Available | Positive | 5344034 - 5345137 | 41794.6 |
| nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase | SAMEA3472044_05370 | Not Available | Negative | 5346168 - 5347247 | 36989.3 |
| cobalamin synthase | SAMEA3472044_05371 | Not Available | Negative | 5347259 - 5348002 | 26387.3 |
| bifunctional adenosylcobalamin biosynthesis protein | SAMEA3472044_05372 | Not Available | Negative | 5347999 - 5348541 | 20034.0 |
| putative transposase, isec23 | SAMEA3472044_05373 | Not Available | Positive | 5350283 - 5350399 | 4238.2 |
| carbohydrate kinase | SAMEA3472044_05374 | Not Available | Positive | 5350595 - 5351809 | 43667.9 |
| cytoplasmic protein | SAMEA3472044_05375 | Not Available | Positive | 5351823 - 5352038 | 8156.69 |
| cytoplasmic protein | SAMEA3472044_05376 | Not Available | Positive | 5352179 - 5352580 | 14927.9 |
| putative inner membrane protein | SAMEA3472044_05377 | Not Available | Positive | 5353066 - 5353551 | 17537.8 |
| putative inner membrane protein | SAMEA3472044_05378 | Not Available | Positive | 5353645 - 5353908 | 9037.75 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





