Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0376 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1354521 bp
Thymine Count
1357943 bp
Guanine Count
1361318 bp
Cytosine Count
1368393 bp
Genome Length
5442589 bp
Protein-coding Genes
4834 genes
Non-Coding Genes
462 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| inner membrane protein | SAMEA3472044_05337 | Not Available | Negative | 5318091 - 5318432 | 12555.9 |
| xylulose kinase | SAMEA3472044_05338 | Not Available | Negative | 5318601 - 5320055 | 52683.4 |
| d-xylose isomerase | SAMEA3472044_05339 | Not Available | Negative | 5320127 - 5321449 | 49721.7 |
| d-xylose transporter subunit xylf | SAMEA3472044_05340 | Not Available | Positive | 5321815 - 5322078 | 9849.03 |
| (acyl-carrier-protein) s-malonyltransferase-like protein | SAMEA3472044_05351 | Not Available | Positive | 5330547 - 5330870 | 12008.5 |
| inner membrane protein | SAMEA3472044_05352 | Not Available | Positive | 5330867 - 5331853 | 38670.6 |
| Trna-ser | Not Available | Not Available | Positive | 5332408 - 5332495 | Not Available |
| dehydrogenase | SAMEA3472044_05354 | Not Available | Positive | 5332729 - 5333667 | 35345.4 |
| putative phosphoesterase | SAMEA3472044_05355 | Not Available | Positive | 5333722 - 5334459 | 26892.0 |
| putative chaperone | SAMEA3472044_05356 | Not Available | Positive | 5334483 - 5335037 | 20725.4 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





