Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0376 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1354521 bp
Thymine Count
1357943 bp
Guanine Count
1361318 bp
Cytosine Count
1368393 bp
Genome Length
5442589 bp
Protein-coding Genes
4834 genes
Non-Coding Genes
462 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hemagglutinin-related protein | SAMEA3472044_05248 | Not Available | Negative | 5239193 - 5239480 | 9516.81 |
| putative hemolysin activator shlb-type | SAMEA3472044_05249 | Not Available | Negative | 5239452 - 5240507 | 38703.8 |
| membrane protein | SAMEA3472044_05251 | Not Available | Negative | 5241755 - 5242498 | 28495.2 |
| putative transposase orf 1, is66 family | SAMEA3472044_05274 | Not Available | Positive | 5256472 - 5257590 | 41760.0 |
| is3 element transposase | SAMEA3472044_05275 | Not Available | Positive | 5257749 - 5258363 | 23561.1 |
| t3ss secreted effector espg | SAMEA3472044_05276 | Not Available | Positive | 5258850 - 5259995 | 41966.5 |
| sdia-regulated domain-containing protein | SAMEA3472044_05277 | Not Available | Positive | 5260123 - 5260941 | 31133.6 |
| is630 transposase | SAMEA3472044_05278 | Not Available | Negative | 5261569 - 5262129 | 21775.2 |
| putative transposase | SAMEA3472044_05279 | Not Available | Negative | 5262193 - 5262423 | 8719.56 |
| t3ss effector nlee | SAMEA3472044_05280 | Not Available | Negative | 5262858 - 5263532 | 26067.2 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





