Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0376 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1354521 bp
Thymine Count
1357943 bp
Guanine Count
1361318 bp
Cytosine Count
1368393 bp
Genome Length
5442589 bp
Protein-coding Genes
4834 genes
Non-Coding Genes
462 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| integrase | SAMEA3472044_05238 | Not Available | Positive | 5228674 - 5229936 | 47791.8 |
| is1 transposase | SAMEA3472044_05239 | Not Available | Negative | 5230122 - 5230325 | 8068.84 |
| is1 protein insb | SAMEA3472044_05240 | Not Available | Negative | 5230326 - 5230619 | 11273.6 |
| rna polymerase sigma factor | SAMEA3472044_05241 | Not Available | Positive | 5231328 - 5231633 | 11302.8 |
| iron(iii) dicitrate sensor protein | SAMEA3472044_05242 | Not Available | Positive | 5231630 - 5232583 | 35592.1 |
| iron(iii) dicitrate tonb-dependent receptor | SAMEA3472044_05243 | Not Available | Positive | 5232670 - 5234994 | 85196.2 |
| iron-dicitrate transporter substrate-binding subunit | SAMEA3472044_05244 | Not Available | Positive | 5235039 - 5235941 | 33122.1 |
| iron(iii) dicitrate transport system, permease protein | SAMEA3472044_05245 | Not Available | Positive | 5235938 - 5236936 | 34894.9 |
| iron-dicitrate transporter subunit fecd | SAMEA3472044_05246 | Not Available | Positive | 5236933 - 5237889 | 34120.7 |
| iron(iii) dicitrate transport system, atp-binding protein | SAMEA3472044_05247 | Not Available | Positive | 5237890 - 5238657 | 28173.4 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





