Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0376 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1354521 bp
Thymine Count
1357943 bp
Guanine Count
1361318 bp
Cytosine Count
1368393 bp
Genome Length
5442589 bp
Protein-coding Genes
4834 genes
Non-Coding Genes
462 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| excision nuclease subunit a | SAMEA3472044_05204 | Not Available | Positive | 5194737 - 5197559 | 103874.0 |
| putative cytoplasmic protein yjbr | SAMEA3472044_05205 | Not Available | Negative | 5197594 - 5197950 | 13520.2 |
| thiamin phosphate synthase | SAMEA3472044_05206 | Not Available | Negative | 5197954 - 5198370 | 15656.8 |
| acid phosphatase/phosphotransferase | SAMEA3472044_05207 | Not Available | Negative | 5198481 - 5199194 | 26104.9 |
| uncharacterised protein | SAMEA3472044_05208 | Not Available | Positive | 5199596 - 5199817 | 8600.4 |
| aromatic amino acid aminotransferase | SAMEA3472044_05209 | Not Available | Negative | 5200319 - 5201512 | 43552.2 |
| alanine racemase | SAMEA3472044_05210 | Not Available | Negative | 5201765 - 5202844 | 39155.2 |
| replicative dna helicase | SAMEA3472044_05211 | Not Available | Negative | 5202897 - 5204312 | 52393.1 |
| quinone oxidoreductase, nadph-dependent | SAMEA3472044_05212 | Not Available | Positive | 5204395 - 5205378 | 35134.2 |
| phage shock protein g | SAMEA3472044_05213 | Not Available | Negative | 5205544 - 5205786 | 9024.0 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





