Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0376 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1354521 bp
Thymine Count
1357943 bp
Guanine Count
1361318 bp
Cytosine Count
1368393 bp
Genome Length
5442589 bp
Protein-coding Genes
4834 genes
Non-Coding Genes
462 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| outer membrane porin protein c | SAMEA3472044_05162 | Not Available | Positive | 5152406 - 5153509 | 40439.4 |
| thiamine biosynthesis lipoprotein | SAMEA3472044_05163 | Not Available | Positive | 5153621 - 5154676 | 38565.0 |
| regulatory protein of adaptative response | SAMEA3472044_05164 | Not Available | Positive | 5154750 - 5155814 | 39238.8 |
| alpha-ketoglutarate-dependent dioxygenase (alkylated dna repair protein) | SAMEA3472044_05165 | Not Available | Positive | 5155814 - 5156467 | 23992.6 |
| yahf/fdra-like protein | SAMEA3472044_05167 | Not Available | Negative | 5156654 - 5156755 | 3681.49 |
| protein | SAMEA3472044_05168 | Not Available | Negative | 5156745 - 5157608 | 32267.6 |
| ankyrin | SAMEA3472044_05169 | Not Available | Negative | 5157648 - 5158253 | 21745.4 |
| inner membrane protein | SAMEA3472044_05170 | Not Available | Positive | 5158511 - 5159008 | 17330.1 |
| lysr family transcriptional regulator | SAMEA3472044_05171 | Not Available | Positive | 5159100 - 5160032 | 34768.9 |
| putative signal transduction protein | SAMEA3472044_05172 | Not Available | Negative | 5160074 - 5161162 | 40741.3 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





