Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0376 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1354521 bp
Thymine Count
1357943 bp
Guanine Count
1361318 bp
Cytosine Count
1368393 bp
Genome Length
5442589 bp
Protein-coding Genes
4834 genes
Non-Coding Genes
462 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type ii secretion system protein k | SAMEA3472044_05131 | Not Available | Positive | 5112392 - 5113369 | 36523.3 |
| type ii secretion system protein l | SAMEA3472044_05132 | Not Available | Positive | 5113366 - 5114544 | 44222.3 |
| general secretion pathway protein yghd | SAMEA3472044_05133 | Not Available | Positive | 5114546 - 5115082 | 20348.6 |
| ybl125 | SAMEA3472044_05134 | Not Available | Negative | 5115363 - 5115935 | 21829.0 |
| aec78 | SAMEA3472044_05135 | Not Available | Negative | 5116032 - 5116274 | 9213.93 |
| aec77 | SAMEA3472044_05136 | Not Available | Negative | 5116241 - 5116729 | 18028.5 |
| toxin of the yeev-yeeu toxin-antitoxin system | SAMEA3472044_05137 | Not Available | Negative | 5116726 - 5117103 | 14180.0 |
| antitoxin of the yeev-yeeu toxin-antitoxin system | SAMEA3472044_05138 | Not Available | Negative | 5117193 - 5117561 | 13550.0 |
| inner membrane protein | SAMEA3472044_05139 | Not Available | Negative | 5118119 - 5118361 | 8955.57 |
| lipid a biosynthesis lauroyl (or palmitoleoyl) acyltransferase | SAMEA3472044_05140 | Not Available | Positive | 5118714 - 5119634 | 35495.5 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





