Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0376 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1354521 bp
Thymine Count
1357943 bp
Guanine Count
1361318 bp
Cytosine Count
1368393 bp
Genome Length
5442589 bp
Protein-coding Genes
4834 genes
Non-Coding Genes
462 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pga biosynthesis protein | SAMEA3472044_05110 | Not Available | Positive | 5083366 - 5083779 | 16082.7 |
| protein phoh (phosphate starvation-inducible protein) | SAMEA3472044_05111 | Not Available | Negative | 5083829 - 5084893 | 39267.1 |
| putative peroxidase | SAMEA3472044_05112 | Not Available | Negative | 5085238 - 5086509 | 46756.9 |
| inactive ferrous ion transporter periplasmic protein efeo | SAMEA3472044_05113 | Not Available | Negative | 5086515 - 5087642 | 41139.8 |
| ferrous iron permease | SAMEA3472044_05114 | Not Available | Negative | 5087700 - 5088530 | 30345.7 |
| sodium/proline symporter (proline permease) | SAMEA3472044_05115 | Not Available | Negative | 5089072 - 5090580 | 54347.3 |
| trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase | SAMEA3472044_05116 | Not Available | Positive | 5091004 - 5094966 | 143834.0 |
| transcriptional regulator ycdc | SAMEA3472044_05117 | Not Available | Negative | 5095006 - 5095644 | 23703.0 |
| glycolate permease | SAMEA3472044_05119 | Not Available | Positive | 5096394 - 5098076 | 58923.7 |
| inner membrane lipoprotein | SAMEA3472044_05120 | Not Available | Positive | 5098561 - 5103120 | 168139.0 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





