Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0376 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1354521 bp
Thymine Count
1357943 bp
Guanine Count
1361318 bp
Cytosine Count
1368393 bp
Genome Length
5442589 bp
Protein-coding Genes
4834 genes
Non-Coding Genes
462 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ig domain-containing protein | SAMEA3472044_05099 | Not Available | Positive | 5065649 - 5069734 | 143358.0 |
| putatve transcriptional regulator ykga | SAMEA3472044_05100 | Not Available | Negative | 5069855 - 5070712 | 33864.7 |
| inner membrane protein | SAMEA3472044_05101 | Not Available | Negative | 5071302 - 5071895 | 21934.7 |
| is91, orf2 | SAMEA3472044_05103 | Not Available | Positive | 5073210 - 5073575 | 13761.2 |
| transposase | SAMEA3472044_05104 | Not Available | Positive | 5073575 - 5074393 | 31791.4 |
| is3 element transposase | SAMEA3472044_05105 | Not Available | Positive | 5074744 - 5075610 | 33542.2 |
| putative diguanylate cyclase | SAMEA3472044_05106 | Not Available | Negative | 5075651 - 5077009 | 51800.5 |
| outer membrane protein pgaa | SAMEA3472044_05107 | Not Available | Positive | 5077596 - 5080019 | 92241.9 |
| lipoprotein ycdr | SAMEA3472044_05108 | Not Available | Positive | 5080028 - 5082046 | 77416.9 |
| n-glycosyltransferase | SAMEA3472044_05109 | Not Available | Positive | 5082039 - 5083364 | 50768.6 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





