Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0376 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1354521 bp
Thymine Count
1357943 bp
Guanine Count
1361318 bp
Cytosine Count
1368393 bp
Genome Length
5442589 bp
Protein-coding Genes
4834 genes
Non-Coding Genes
462 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterised protein | SAMEA3472044_05077 | Not Available | Positive | 5042356 - 5042559 | 7796.35 |
| transposase | SAMEA3472044_05079 | Not Available | Positive | 5042878 - 5043336 | 18058.0 |
| transposase | SAMEA3472044_05080 | Not Available | Negative | 5043472 - 5044506 | 39154.6 |
| p pilus assembly protein, pilin fima | SAMEA3472044_05081 | Not Available | Negative | 5044859 - 5045332 | 17028.6 |
| uncharacterised protein | SAMEA3472044_05082 | Not Available | Negative | 5045423 - 5045728 | 11560.3 |
| transcriptional regulator | SAMEA3472044_05083 | Not Available | Negative | 5048589 - 5048999 | 15467.8 |
| xanthine dehydrogenase accessory factor | SAMEA3472044_05084 | Not Available | Negative | 5048978 - 5049934 | 34956.9 |
| putative xanthine dehydrogenase, molybdenum-binding subunit | SAMEA3472044_05085 | Not Available | Negative | 5049944 - 5052142 | 78118.9 |
| putative xanthine dehydrogenase, fad-binding subunit | SAMEA3472044_05086 | Not Available | Negative | 5052139 - 5053095 | 33887.8 |
| putative xanthine dehydrogenase, iron-sulfur binding subunit | SAMEA3472044_05087 | Not Available | Negative | 5053092 - 5053781 | 24328.1 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





