Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0376 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1354521 bp
Thymine Count
1357943 bp
Guanine Count
1361318 bp
Cytosine Count
1368393 bp
Genome Length
5442589 bp
Protein-coding Genes
4834 genes
Non-Coding Genes
462 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protease iga1 | SAMEA3472044_05034 | Not Available | Positive | 4989573 - 4993664 | 145511.0 |
| site-specific recombinase | SAMEA3472044_05036 | Not Available | Negative | 4994498 - 4995088 | 21821.5 |
| qin prophage dna-binding transcriptional regulator | SAMEA3472044_05037 | Not Available | Negative | 4995407 - 4995640 | 8810.89 |
| methylase | SAMEA3472044_05038 | Not Available | Negative | 4996188 - 4996856 | 24518.5 |
| putative protease | SAMEA3472044_05040 | Not Available | Negative | 4997402 - 4998886 | 55070.2 |
| outer membrane protease | SAMEA3472044_05041 | Not Available | Negative | 4999073 - 5000026 | 35549.1 |
| porin thermoregulatory protein | SAMEA3472044_05042 | Not Available | Negative | 5000539 - 5001300 | 28991.5 |
| uncharacterised protein | SAMEA3472044_05043 | Not Available | Negative | 5001483 - 5002373 | 33076.5 |
| bacteriophage n4 receptor, outer membrane subunit | SAMEA3472044_05044 | Not Available | Negative | 5002374 - 5005346 | 111355.0 |
| bacteriophage n4 adsorption protein b | SAMEA3472044_05045 | Not Available | Negative | 5005333 - 5007570 | 85354.3 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





