Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0376 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1354521 bp
Thymine Count
1357943 bp
Guanine Count
1361318 bp
Cytosine Count
1368393 bp
Genome Length
5442589 bp
Protein-coding Genes
4834 genes
Non-Coding Genes
462 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative yafb protein | SAMEA3472044_05014 | Not Available | Negative | 4974484 - 4975143 | 24271.4 |
| putative resolvase (protein d) | SAMEA3472044_05015 | Not Available | Negative | 4975258 - 4976073 | 30743.5 |
| uncharacterised protein | SAMEA3472044_05016 | Not Available | Positive | 4976733 - 4976981 | 9511.32 |
| dna-binding transcriptional regulator | SAMEA3472044_05017 | Not Available | Negative | 4977514 - 4977882 | 14071.2 |
| translation-dependent mrna interferase, toxin of the higb-higa toxin-antitoxin system | SAMEA3472044_05018 | Not Available | Negative | 4977888 - 4978190 | 11706.1 |
| uncharacterised protein | SAMEA3472044_05019 | Not Available | Positive | 4978395 - 4978502 | 4076.85 |
| uncharacterised protein | SAMEA3472044_05020 | Not Available | Positive | 4978931 - 4979242 | 11535.5 |
| uncharacterised protein | SAMEA3472044_05021 | Not Available | Negative | 4979333 - 4979779 | 16142.7 |
| uncharacterised protein | SAMEA3472044_05022 | Not Available | Negative | 4980390 - 4980881 | 18818.7 |
| uncharacterised protein | SAMEA3472044_05023 | Not Available | Positive | 4981427 - 4982224 | 30456.2 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





