Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0376 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1354521 bp
Thymine Count
1357943 bp
Guanine Count
1361318 bp
Cytosine Count
1368393 bp
Genome Length
5442589 bp
Protein-coding Genes
4834 genes
Non-Coding Genes
462 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding protein | SAMEA3472044_04983 | Not Available | Negative | 4952780 - 4953070 | 10614.1 |
| prophage protein gp49 | SAMEA3472044_04984 | Not Available | Negative | 4953067 - 4953378 | 11880.8 |
| replication protein of incfii family | SAMEA3472044_04985 | Not Available | Negative | 4954351 - 4955208 | 32705.5 |
| replication protein | SAMEA3472044_04987 | Not Available | Negative | 4955520 - 4955768 | 9006.91 |
| w0003 | SAMEA3472044_04988 | Not Available | Negative | 4956008 - 4956598 | 22868.3 |
| hha-family regulatory protein | SAMEA3472044_04989 | Not Available | Negative | 4956636 - 4956845 | 8320.99 |
| nuclease | SAMEA3472044_04990 | Not Available | Negative | 4956891 - 4957352 | 17868.7 |
| is1 transposase | SAMEA3472044_04991 | Not Available | Positive | 4957652 - 4957927 | 9868.96 |
| is1 transposase | SAMEA3472044_04992 | Not Available | Positive | 4957972 - 4958349 | 14974.3 |
| paral fimbrial-like protein | SAMEA3472044_04993 | Not Available | Positive | 4958678 - 4959226 | 18973.3 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





