Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0376 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1354521 bp
Thymine Count
1357943 bp
Guanine Count
1361318 bp
Cytosine Count
1368393 bp
Genome Length
5442589 bp
Protein-coding Genes
4834 genes
Non-Coding Genes
462 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| plasmid stable inheritance protein parb | SAMEA3472044_04973 | Not Available | Positive | 4940985 - 4941335 | 13152.7 |
| uncharacterised protein | SAMEA3472044_04974 | Not Available | Negative | 4941812 - 4942246 | 17086.8 |
| uncharacterised protein | SAMEA3472044_04975 | Not Available | Negative | 4942240 - 4942662 | 16706.3 |
| intestinal colonization factor encoded by prophage cp-933o | SAMEA3472044_04976 | Not Available | Negative | 4942948 - 4943706 | 27760.8 |
| transposase for insertion sequence is100 | SAMEA3472044_04977 | Not Available | Negative | 4944503 - 4944877 | 14906.2 |
| transposase | SAMEA3472044_04978 | Not Available | Positive | 4944882 - 4945559 | 25262.9 |
| transposase | SAMEA3472044_04979 | Not Available | Positive | 4945565 - 4946674 | 41978.2 |
| hef nuclease | SAMEA3472044_04980 | Not Available | Positive | 4947112 - 4949712 | 98771.4 |
| uncharacterized protein containing caspase domain | SAMEA3472044_04981 | Not Available | Negative | 4951079 - 4952032 | 35083.8 |
| uncharacterised protein | SAMEA3472044_04982 | Not Available | Negative | 4952042 - 4952416 | 14274.0 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





