Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0376 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1354521 bp
Thymine Count
1357943 bp
Guanine Count
1361318 bp
Cytosine Count
1368393 bp
Genome Length
5442589 bp
Protein-coding Genes
4834 genes
Non-Coding Genes
462 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| major facilitator superfamily protein | SAMEA3472044_04953 | Not Available | Positive | 4922167 - 4923255 | 37358.3 |
| superoxide dismutase | SAMEA3472044_04954 | Not Available | Negative | 4923490 - 4924071 | 21266.8 |
| putative exported hydrolase | SAMEA3472044_04955 | Not Available | Negative | 4924199 - 4925014 | 29918.2 |
| monothiol glutaredoxin ydhd | SAMEA3472044_04956 | Not Available | Positive | 4925348 - 4925695 | 12879.5 |
| atp-dependent helicase | SAMEA3472044_04957 | Not Available | Negative | 4925746 - 4930362 | 169425.0 |
| ribonuclease t | SAMEA3472044_04958 | Not Available | Negative | 4930455 - 4931102 | 23534.0 |
| glyoxalase i | SAMEA3472044_04959 | Not Available | Negative | 4931205 - 4931612 | 14920.7 |
| transposase | SAMEA3472044_04960 | Not Available | Positive | 4932283 - 4932930 | 24063.4 |
| transposase | SAMEA3472044_04961 | Not Available | Positive | 4932930 - 4933277 | 13055.0 |
| is orf | SAMEA3472044_04962 | Not Available | Positive | 4933297 - 4933725 | 15975.0 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





