Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0376 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1354521 bp
Thymine Count
1357943 bp
Guanine Count
1361318 bp
Cytosine Count
1368393 bp
Genome Length
5442589 bp
Protein-coding Genes
4834 genes
Non-Coding Genes
462 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterised protein | SAMEA3472044_04921 | Not Available | Negative | 4892841 - 4892972 | 4375.5 |
| ybl85 | SAMEA3472044_04922 | Not Available | Negative | 4892972 - 4893406 | 16616.9 |
| ybl85 | SAMEA3472044_04923 | Not Available | Negative | 4893394 - 4893795 | 15586.3 |
| malate transporter | SAMEA3472044_04924 | Not Available | Negative | 4893962 - 4894531 | 21633.9 |
| uncharacterised protein | SAMEA3472044_04925 | Not Available | Positive | 4894736 - 4894936 | 7444.3 |
| putative phage-related regulatory protein | SAMEA3472044_04926 | Not Available | Positive | 4896259 - 4896465 | 7861.64 |
| uncharacterised protein | SAMEA3472044_04927 | Not Available | Positive | 4896552 - 4897154 | 23600.4 |
| cp4-57 prophage protein | SAMEA3472044_04928 | Not Available | Negative | 4897476 - 4898960 | 55746.4 |
| cysteine desulfurase (selenocysteine lyase) | SAMEA3472044_04929 | Not Available | Positive | 4900029 - 4900154 | 4735.91 |
| cysteine desulfuration protein | SAMEA3472044_04930 | Not Available | Positive | 4900167 - 4900583 | 15757.2 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





