Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0376 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1354521 bp
Thymine Count
1357943 bp
Guanine Count
1361318 bp
Cytosine Count
1368393 bp
Genome Length
5442589 bp
Protein-coding Genes
4834 genes
Non-Coding Genes
462 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator | SAMEA3472044_04911 | Not Available | Negative | 4883367 - 4884398 | 38341.2 |
| pts system eiia component | SAMEA3472044_04912 | Not Available | Positive | 4884669 - 4884899 | 8500.21 |
| pts system transporter subunit iib | SAMEA3472044_04913 | Not Available | Positive | 4885128 - 4885415 | 9993.36 |
| pts system eiic component | SAMEA3472044_04914 | Not Available | Positive | 4885428 - 4886684 | 44326.8 |
| putative transposase (partial) | SAMEA3472044_04915 | Not Available | Negative | 4886900 - 4887184 | 10925.4 |
| deoxyribose specific mutarotase | SAMEA3472044_04916 | Not Available | Negative | 4887606 - 4888619 | 38175.6 |
| major facilitator superfamily protein | SAMEA3472044_04917 | Not Available | Negative | 4888631 - 4889611 | 36191.9 |
| major facilitator superfamily protein | SAMEA3472044_04918 | Not Available | Negative | 4889562 - 4889948 | 14265.6 |
| deoxyribokinase | SAMEA3472044_04919 | Not Available | Negative | 4889976 - 4890896 | 33223.8 |
| transcriptional regulator | SAMEA3472044_04920 | Not Available | Positive | 4891199 - 4891981 | 29079.2 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





