Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0376 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1354521 bp
Thymine Count
1357943 bp
Guanine Count
1361318 bp
Cytosine Count
1368393 bp
Genome Length
5442589 bp
Protein-coding Genes
4834 genes
Non-Coding Genes
462 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| inner membrane protein | SAMEA3472044_00039 | Not Available | Positive | 34795 - 35100 | 9508.04 |
| outer membrane lipoprotein | SAMEA3472044_00040 | Not Available | Positive | 35207 - 35851 | 24268.9 |
| group 4 capsule (g4c) polysaccharide, ymcb | SAMEA3472044_00041 | Not Available | Positive | 35848 - 36594 | 27267.6 |
| putative lipoprotein | SAMEA3472044_00042 | Not Available | Positive | 36594 - 38690 | 78675.2 |
| polysaccharide export protein | SAMEA3472044_00043 | Not Available | Positive | 38736 - 39875 | 41743.2 |
| phosphotyrosine-protein phosphatase | SAMEA3472044_00044 | Not Available | Positive | 39863 - 40309 | 16386.9 |
| cryptic autophosphorylating protein tyrosine kinase etk | SAMEA3472044_00045 | Not Available | Positive | 40329 - 42509 | 81246.5 |
| periplasmic appa protein | SAMEA3472044_00046 | Not Available | Negative | 42624 - 43922 | 47059.5 |
| small predicted membrane protein | SAMEA3472044_00047 | Not Available | Negative | 44002 - 44094 | 3597.68 |
| cytochrome bd-ii oxidase subunit 2 | SAMEA3472044_00048 | Not Available | Negative | 44107 - 45243 | 42426.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





