Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0376 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1354521 bp
Thymine Count
1357943 bp
Guanine Count
1361318 bp
Cytosine Count
1368393 bp
Genome Length
5442589 bp
Protein-coding Genes
4834 genes
Non-Coding Genes
462 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| outer membrane porin protein | SAMEA3472044_04849 | Not Available | Negative | 4826275 - 4826817 | 18596.8 |
| nudix-family hydrolase | SAMEA3472044_04850 | Not Available | Positive | 4827097 - 4827522 | 16371.6 |
| phosphoglycerate mutase | SAMEA3472044_04851 | Not Available | Negative | 4827561 - 4828163 | 22326.9 |
| udp-4-amino-4-deoxy-l-arabinose--oxoglutarate aminotransferase | SAMEA3472044_04852 | Not Available | Positive | 4828471 - 4829346 | 31568.2 |
| bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/imp cyclohydrolase | SAMEA3472044_04853 | Not Available | Positive | 4830099 - 4831688 | 57317.4 |
| phosphoribosylglycineamide synthetase | SAMEA3472044_04854 | Not Available | Positive | 4831700 - 4832989 | 45899.9 |
| two-component system response regulator | SAMEA3472044_04855 | Not Available | Negative | 4832986 - 4834311 | 48355.4 |
| sensor protein zras | SAMEA3472044_04856 | Not Available | Negative | 4834308 - 4835684 | 50462.0 |
| uncharacterised protein | SAMEA3472044_04857 | Not Available | Positive | 4835791 - 4835919 | 5024.87 |
| zinc resistance protein | SAMEA3472044_04858 | Not Available | Positive | 4835922 - 4836341 | 15042.1 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





