Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0376 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1354521 bp
Thymine Count
1357943 bp
Guanine Count
1361318 bp
Cytosine Count
1368393 bp
Genome Length
5442589 bp
Protein-coding Genes
4834 genes
Non-Coding Genes
462 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna gyrase subunit a | SAMEA3472044_04829 | Not Available | Negative | 4799322 - 4801949 | 96983.3 |
| 3-demethylubiquinone-9 3-methyltransferase | SAMEA3472044_04830 | Not Available | Positive | 4802096 - 4802818 | 26587.0 |
| adhesin | SAMEA3472044_04831 | Not Available | Negative | 4802959 - 4806711 | 131220.0 |
| ribonucleoside-diphosphate reductase | SAMEA3472044_04832 | Not Available | Positive | 4807407 - 4809692 | 85780.0 |
| ribonucleotide-diphosphate reductase subunit beta | SAMEA3472044_04833 | Not Available | Positive | 4809926 - 4811056 | 43519.6 |
| putative ferredoxin | SAMEA3472044_04834 | Not Available | Positive | 4811056 - 4811310 | 9293.29 |
| ph-inducible protein involved in stress response (putative kinase) | SAMEA3472044_04835 | Not Available | Negative | 4811364 - 4812014 | 25297.4 |
| yfah | SAMEA3472044_04836 | Not Available | Positive | 4812229 - 4812435 | 7533.58 |
| glycerophosphodiester phosphodiesterase | SAMEA3472044_04837 | Not Available | Negative | 4812477 - 4813553 | 40868.6 |
| glycerol-3-phosphate transporter | SAMEA3472044_04838 | Not Available | Negative | 4813558 - 4814916 | 50312.3 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





