Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0376 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1354521 bp
Thymine Count
1357943 bp
Guanine Count
1361318 bp
Cytosine Count
1368393 bp
Genome Length
5442589 bp
Protein-coding Genes
4834 genes
Non-Coding Genes
462 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| biofilm-dependent modulation protein | SAMEA3472044_04809 | Not Available | Negative | 4778533 - 4778748 | 7987.26 |
| peroxiredoxin (osmotically-inducible protein c) | SAMEA3472044_04810 | Not Available | Positive | 4779093 - 4779524 | 15089.0 |
| abc transporter atp-binding protein | SAMEA3472044_04811 | Not Available | Negative | 4779580 - 4780506 | 34543.1 |
| d-ala-d-ala transporter subunit ddpd | SAMEA3472044_04812 | Not Available | Negative | 4780499 - 4781485 | 36056.0 |
| abc transporter permease | SAMEA3472044_04813 | Not Available | Negative | 4781482 - 4782378 | 31931.8 |
| abc transporter permease | SAMEA3472044_04814 | Not Available | Negative | 4782375 - 4783397 | 37441.5 |
| abc transporter substrate-binding protein | SAMEA3472044_04815 | Not Available | Negative | 4783399 - 4784949 | 57635.1 |
| d-alanyl-d-alanine dipeptidase | SAMEA3472044_04816 | Not Available | Negative | 4784963 - 4785544 | 21214.2 |
| heme-regulated cyclic amp phosphodiesterase (direct oxygen sensor protein) | SAMEA3472044_04817 | Not Available | Negative | 4785802 - 4788201 | 90249.6 |
| putative signal transduction protein | SAMEA3472044_04818 | Not Available | Negative | 4788226 - 4789608 | 53179.7 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





