Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0376 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1354521 bp
Thymine Count
1357943 bp
Guanine Count
1361318 bp
Cytosine Count
1368393 bp
Genome Length
5442589 bp
Protein-coding Genes
4834 genes
Non-Coding Genes
462 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nitrite extrusion protein 2 | SAMEA3472044_04798 | Not Available | Negative | 4765318 - 4766706 | 49884.1 |
| glycoprotein with ribonuclease inhibitor domain (yddk) (modular protein) | SAMEA3472044_04799 | Not Available | Negative | 4767030 - 4768361 | 50619.9 |
| outer membrane porin | SAMEA3472044_04800 | Not Available | Negative | 4768385 - 4768675 | 10722.6 |
| inner membrane protein | SAMEA3472044_04801 | Not Available | Negative | 4768934 - 4769758 | 29462.6 |
| formate dehydrogenase, nitrate-inducible, iron-sulfur subunit | SAMEA3472044_04803 | Not Available | Positive | 4773107 - 4773991 | 32240.4 |
| formate dehydrogenase-n subunit gamma | SAMEA3472044_04804 | Not Available | Positive | 4773984 - 4774637 | 25370.0 |
| putative plasmid maintenance protein | SAMEA3472044_04805 | Not Available | Negative | 4774866 - 4775150 | 10401.7 |
| alcohol dehydrogenase | SAMEA3472044_04806 | Not Available | Negative | 4775296 - 4776306 | 35371.6 |
| malate dehydrogenase | SAMEA3472044_04807 | Not Available | Negative | 4776440 - 4778137 | 63198.1 |
| 30s ribosomal subunit s22 | SAMEA3472044_04808 | Not Available | Negative | 4778294 - 4778431 | 5077.08 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





