Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0376 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1354521 bp
Thymine Count
1357943 bp
Guanine Count
1361318 bp
Cytosine Count
1368393 bp
Genome Length
5442589 bp
Protein-coding Genes
4834 genes
Non-Coding Genes
462 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| t3ss structure protein escj | SAMEA3472044_04768 | Not Available | Positive | 4739935 - 4740507 | 20758.1 |
| secretion switching protein sepd | SAMEA3472044_04769 | Not Available | Positive | 4740513 - 4740968 | 17550.0 |
| t3ss structure protein escc | SAMEA3472044_04770 | Not Available | Positive | 4740968 - 4742506 | 56228.9 |
| chaperone cesd | SAMEA3472044_04771 | Not Available | Positive | 4742520 - 4742975 | 17503.7 |
| positive regulator grla | SAMEA3472044_04772 | Not Available | Negative | 4743359 - 4743772 | 16053.4 |
| negative regulator grlr | SAMEA3472044_04773 | Not Available | Negative | 4743828 - 4744199 | 13943.9 |
| transglycosylase slt domain protein | SAMEA3472044_04774 | Not Available | Positive | 4744395 - 4744853 | 17028.5 |
| t3ss structure protein escu | SAMEA3472044_04775 | Not Available | Negative | 4744850 - 4745887 | 39165.5 |
| t3ss structure protein esct | SAMEA3472044_04776 | Not Available | Negative | 4745880 - 4746656 | 28718.9 |
| escs | SAMEA3472044_04777 | Not Available | Negative | 4746656 - 4746925 | 9921.56 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





