Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0376 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1354521 bp
Thymine Count
1357943 bp
Guanine Count
1361318 bp
Cytosine Count
1368393 bp
Genome Length
5442589 bp
Protein-coding Genes
4834 genes
Non-Coding Genes
462 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transposase orf1 of is3 family is element | SAMEA3472044_04696 | Not Available | Positive | 4655317 - 4655619 | 11583.1 |
| transposase | SAMEA3472044_04697 | Not Available | Positive | 4655832 - 4655990 | 6090.38 |
| putative transposase | SAMEA3472044_04698 | Not Available | Positive | 4655992 - 4656234 | 9100.1 |
| is1 transposase | SAMEA3472044_04699 | Not Available | Positive | 4657341 - 4657616 | 9902.97 |
| is1 protein insb | SAMEA3472044_04700 | Not Available | Positive | 4657745 - 4658038 | 11467.1 |
| uncharacterised protein | SAMEA3472044_04701 | Not Available | Negative | 4658049 - 4658426 | 13989.5 |
| putative helicase | SAMEA3472044_04702 | Not Available | Negative | 4658459 - 4661182 | 102475.0 |
| uncharacterised protein | SAMEA3472044_04703 | Not Available | Negative | 4661194 - 4661700 | 19196.6 |
| protein of uncharacterised function (duf1156) | SAMEA3472044_04704 | Not Available | Negative | 4661697 - 4664960 | 122371.0 |
| uncharacterised protein | SAMEA3472044_04705 | Not Available | Negative | 4665000 - 4665998 | 36988.6 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





