Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0376 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1354521 bp
Thymine Count
1357943 bp
Guanine Count
1361318 bp
Cytosine Count
1368393 bp
Genome Length
5442589 bp
Protein-coding Genes
4834 genes
Non-Coding Genes
462 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| conjugal transfer protein trax | SAMEA3472044_04686 | Not Available | Negative | 4643652 - 4644236 | 22479.6 |
| conjugal transfer protein traw | SAMEA3472044_04687 | Not Available | Negative | 4644265 - 4645467 | 42994.3 |
| conjugal transfer protein trav | SAMEA3472044_04688 | Not Available | Negative | 4645434 - 4646048 | 23347.2 |
| putative antitoxin of toxin-antitoxin system | SAMEA3472044_04689 | Not Available | Positive | 4646681 - 4646872 | 7069.34 |
| rele plasmid addiction protein | SAMEA3472044_04690 | Not Available | Positive | 4646869 - 4647156 | 11133.9 |
| is91, orf2 | SAMEA3472044_04691 | Not Available | Negative | 4647246 - 4647506 | 10018.9 |
| addiction module antidote-like protein | SAMEA3472044_04692 | Not Available | Negative | 4647685 - 4647912 | 8154.79 |
| glycosyltransferase | SAMEA3472044_04693 | Not Available | Positive | 4648236 - 4649411 | 44732.0 |
| outer membrane autotransporter barrel domain-containing protein | SAMEA3472044_04694 | Not Available | Positive | 4649411 - 4653277 | 131274.0 |
| inner membrane protein | SAMEA3472044_04695 | Not Available | Negative | 4653578 - 4655104 | 57531.0 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





