Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0376 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1354521 bp
Thymine Count
1357943 bp
Guanine Count
1361318 bp
Cytosine Count
1368393 bp
Genome Length
5442589 bp
Protein-coding Genes
4834 genes
Non-Coding Genes
462 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| relaxosome component | SAMEA3472044_04663 | Not Available | Positive | 4621703 - 4622035 | 12614.3 |
| relaxase/mobilization nuclease domain-containing protein | SAMEA3472044_04664 | Not Available | Positive | 4622046 - 4625405 | 129865.0 |
| conjugal transfer protein, trbc | SAMEA3472044_04665 | Not Available | Negative | 4625442 - 4626416 | 36593.4 |
| relaxase/mobilization nuclease domain-containing protein | SAMEA3472044_04666 | Not Available | Positive | 4626483 - 4626728 | 9400.51 |
| conjugal transfer protein, trbc | SAMEA3472044_04667 | Not Available | Negative | 4626764 - 4627711 | 35666.4 |
| conjugal transfer protein, trbc | SAMEA3472044_04668 | Not Available | Negative | 4627865 - 4629556 | 63782.7 |
| conjugal transfer protein, trbc | SAMEA3472044_04671 | Not Available | Negative | 4630536 - 4631273 | 28085.8 |
| conjugal transfer protein, trbb | SAMEA3472044_04672 | Not Available | Negative | 4631266 - 4632336 | 39581.5 |
| conjugal transfer protein | SAMEA3472044_04673 | Not Available | Negative | 4632355 - 4633563 | 46020.0 |
| uncharacterised protein | SAMEA3472044_04675 | Not Available | Positive | 4634779 - 4634874 | 3371.45 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





